I haven't noticed a problem in AX 2012 with canceling a recalculation, but I haven't done that many yet. Yes, in previous versions it was not 100% reliable and could easily leave things out of whack. I recall in 4.0 I did everything I could to avoid canceling a recalculation it was so bad. In theory, just running recalculation again should just make incremental adjustments on top of all previous adjustments, to the same end result as canceling and starting over with a single recalculation, at least provided the same parameters are in play. Obviously if you ran 4 times with a Maximum throughputs of 10 each time, you would probably have to use 40 to achieve the same result in one pass. 100k seems like a lot. I recall $10 on 4 million in inventory. There's no reason for COGS to differ at all. I would find a specific single case of that and drill into that problem until I figured out what was going wrong. That's unacceptable in my opinion.
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